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A compilation and categorization of alternative splicing resources

asg - Alternative Splicing Gallery

Tool nameasg - Alternative Splicing Gallery
URLhttp://statgen.ncsu.edu/asg/
Important featuresIt integrates transcript information into splicing graphs in order to visualize gene structure and alternative splicing.
CitationsLeipzig J, Pevzner P, Heber S. The Alternative Splicing Gallery (ASG): brIDging the gap between genome and transcriptome. Nucleic AcIDs Res. 2004 Aug 3;32(13):3977-83. Print 2004. PubMed PMID: 15292448; PubMed Central PMCID:PMC506815.
Year of publication2004
Rank by usage frequency100
CommentsGene information includes chromosome number, start and end position, strand information.
FunctionExon detail: sequence, Intron detail: sequence, Number of splice events, Types of alternative splice events, Display of splice events, BLAST, Gene Information, Finds alternative splicing in human
Category
Input file formatEnsembl, UniGene, TIGR, RefSeq, STACK Identifiers.
Output file format
Limitation

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