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Suggested Readings
A compilation and categorization of multiple sequence alignment resources

ABA - A-Bruijn Alignment

Tool nameABA - A-Bruijn Alignment
Important featuresIts flexibility for aligning the sequences. It is useful in the alignment of genomic sequences containing duplications and inversions.
CitationsRaphael B, Zhi D, Tang H, Pevzner P. A novel method for multiple alignment of sequences with repeated and shuffled elements. Genome Res. 2004 Nov;14(11):2336-46. PubMed PMID: 15520295; PubMed Central PMCID: PMC525693.
Year of publication2004
Rank by usage frequency96
CategoryNeed registration, Free, Downloadable
Other detailsShould be installed in linux system, need to register for academic use.
Other features
Other citationsJones NC, Zhi D, Raphael BJ. AliWABA: alignment on the web through an A-Bruijn approach. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W613-6. PubMed PMID: 16845083; PubMed Central PMCID: PMC1538870.

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