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A compilation and categorization of next-generation sequencing resources

AGE - Alignment with Gap Excision

Tool nameAGE - Alignment with Gap Excision
URLhttp://sv.gersteinlab.org/age
Important features1. AGE (Alignment with Gap Excision) is a tool for structural variant detection. 2. It maximize the alignment score by generating a gap jump. 3. It aligns two sequence at their 5' and 3' ends.
CitationsAbyzov A, Gerstein M. AGE: defining breakpoints of genomic structural variants at single-nucleotide resolution, through optimal alignments with gap excision. Bioinformatics. 2011 Mar 1;27(5):595-603. Epub 2011 Jan 13. PubMed PMID: 21233167; PubMed Central PMCID: PMC3042181.
Year of publication2011
Rank by usage frequency1
Comments
FunctionStructural variant discovery
CategoryFree, Downloadable
LicenseCreatives Commons license
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