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Created on: 09-Sep-2012   Last updated on: 09-Sep-2012  |  How to cite this?
Total resources - 22
A list of resources for organelles
Akhilesh Bajpai and Sravanthi Davuluri (Correspondence: Acharya KK, kshitish@ibab.ac.in)

Resources
Short description*Rank by usage frequency Click to Edit / Add comments
PlasmID
http://plasmid.med.harvard.edu/PLASMID
Information on plasmids
40
MITOMAP - A human mitochondrial genome database
http://www.mitomap.org
Polymorphisms and mutations of the human mitochondrial DNA
50
LOCATE - Subcellular Localization Database
http://locate.imb.uq.edu.au
Curated database for the membrane organization and subcellular localization of proteins
92
MITOCHONDRIAL DISORDERS
http://neuromuscular.wustl.edu/mitosyn.html
96
mtDB - Human Mitochondrial Genome Database
http://www.mtdb.igp.uu.se
96
PeroxisomeDB - Peroxisome Database
http://www.peroxisomedb.org
Integrated curated information on peroxisomal genes
96
plprot - Plastid Protein Database
http://www.plprot.ethz.ch
Integrates data from large scale proteome analyses of different plastid types
96
The Plant Organelles Database
http://podb.nibb.ac.jp/Organellome
Images and movies of organelles in various tissues during different developmental stages in response to environmental stimuli
96
Chloroplast Genome Database
http://chloroplast.cbio.psu.edu
100
FUGOID - Functional Genomics of Organelle Introns Database
http://fugoid.webhost.utexas.edu/introndata/main.htm
Comprehensive functional and structural information on organellar (mitochondria and chloroplast) introns
100

URL not working as on 9 Feb 2015 (confirmed on 15 Nov 2016)
HMPDb - Human Mitochondrial Protein Database
http://bioinfo.nist.gov/hmpd
100
MamMiBase - Mammalian Mitochondrial Genomics Database
http://www.mammibase.lncc.br
Individual gene sequence alignments for genes in complete mammalian mitochondrial genomes
100
Mitome
http://www.mitome.info
Interactive database for comparative mitochondrial genomics
100

Website/domain is for sale as the URL opens a page, which is not related to Mitome database, as on 9 Feb 2015 (confirmed on 15 Nov 2016)
mtDNAmanager
http://mtmanager.yonsei.ac.kr
Management and quality analysis of mitochondrial DNA control region sequences
100
mtSNP - Human Mitochondrial Genome Polymorphism Database
http://mtsnp.tmig.or.jp/mtsnp/index_e.shtml
100
NPD - Nuclear Protein Database
http://npd.hgu.mrc.ac.uk
Information on proteins that are localised to the nucleus of vertebrate cells
100
Nucleolar Proteome Database
http://www.lamondlab.com/NOPdb
Information on proteomic analysis of human nucleoli
100
OGRe - Organellar Genome Retrieval system
http://drake.physics.mcmaster.ca/ogre
Complete mitochondrial genome sequences of 1244 metazoan organisms
100
Organelle DB - A database of organelle proteins, and subcellular structures
http://organelledb.lsi.umich.edu
"Catalog of the known organelle proteins, and subcellular structures or complexes"
100
PCR primers in the chloroplast genome
http://bfw.ac.at/rz/bfwcms.web?dok=4961
100
YMP - Yeast Mitochondrial Proteome
http://www.biochem.oulu.fi/proteomics/ymp.html
100

URL not working as on 15 Nov 2016 (confirmed on 23 Feb 2017)
YMPD - Yeast Mitochondrial Protein Database
http://bmerc-www.bu.edu/projects/mito
A compilation of information on budding yeast mitoproteins
100

URL not working as on 9 Feb 2015 (confirmed on 15 Nov 2016)
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